PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030940.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 639aa    MW: 71215.2 Da    PI: 8.5685
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030940.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.61.2e-18398497198
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       f+k l+ sd+++ grlvlpkk+ae++   ++++e+  l+++d sg++W +++++  +++s++yvl+ G     ++ +L++gD+v F++++  e
  TRIDC2BG030940.9 398 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMHLQAGDTVSFSRID-PE 488
                       89**************************555566778***************9989999999***9.********************987.67 PP

                       E..EEEEE- CS
                B3  90 felvvkvfr 98 
                       ++lv+++++
  TRIDC2BG030940.9 489 GKLVMGFRK 497
                       767777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 639 aa     Download sequence    
QQQQGPPPAS LQQQPRICFN AHCKDPKSEG PRRRGWRLRS GDYAELCDRC YGSFEHGTFC  60
ETFHSEVAGW RKCEACGKRL HCGCIVSVHA YALLDAGGVD CILCARKSYA AMAPSQMWST  120
PTVHMSQNVA DRKDSYVKSW RPPTGQISSQ WRQNHQLWNM STIQADLQQR LAYEFDRPSG  180
SEKLPPGRTF IHAQEKKSDD MHDRPTTPAG MGQIIRDRYA NGLGQQTSMD PTHSSTPYQR  240
EGPNPNSLHD PSHHVGESDP LSSRKGIISD GGSTVSTGFK LDPHHPSILK DDAASTLPTM  300
GGYTITNYPP VPGRSDHLRI IPNNPQQPPT TVPLSVVQKQ FYSHSVIEPN YQAQFRNGKP  360
RMDPKARSEL LPRYWPRITD KELQHLSGDS NSVITPLFEK MLSASDAGRI GRLVLPKKCA  420
EAYFPPISQP EGLPLKVQDA SGKEWVFQFR FWPNNNSRMY VLEGVTPCIQ SMHLQAGDTV  480
SFSRIDPEGK LVMGFRKTKT QEQIFRQEEP TKPANAAPNL PDVNVNVTAP DSSPNSSLVR  540
PNKVNTENKD SSPVEQAASK IDKGGVAQKE GSGTVRTSPG PVKRKATSIG PKIKRFRIDN  600
EESMELKITW EEAQELLRPP LKAPSVVIVD GHEFEEYEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.17e-88B3 family protein