PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG030940.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 992aa MW: 109947 Da PI: 8.66

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG030940.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.7	2.2e-18	488	587	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d sg++W +++++ +++s++yvl+ G ++ +L++gD+v F++++ e TRIDC2BG030940.7 488 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMHLQAGDTVSFSRID-PE 578 89************************555566778***********99899999999.*******************987.67 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2BG030940.7 579 GKLVMGFRK 587 767777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 992 aa Download sequence
YFPAPPRFPR LPKTPPRPAP PRPPHRRPRV PAMSSSGPPN PIAPAHATVL TGTPMSVQPQ 60 PKPPPPPQQP SGSAAPPPSQ QPQPQHQRQQ QQQQGPPPAS LQQQPRICFN AHCKDPKSEG 120 PRRRGWRLRS GDYAELCDRC YGSFEHGTFC ETFHSEVAGW RKCEACGKRL HCGCIVSVHA 180 YALLDAGGVD CILCARKSYA AMAPSQMWST PTVHMSQNVA DRKDSYVKSW RPPTGQISSQ 240 WRQNHQLWNM STIQADLQQR LAYEFDRPSG SEKLPPGRTF IHAQEKKSDD MHDRPTTPAG 300 MGQIIRDRYA NGLGQQTSMD PTHSSTPYQR EGPNPNSLHD PSHHVGESDP LSSRKGIISD 360 GGSTVSTGFK LDPHHPSILK DDAASTLPTM GGYTITNYPP VPGRSDHLRI IPNNPQQPPT 420 TVPLSVVQKQ FYSHSVIEPN YQAQFRNGKP RMDPKARSEL LPRYWPRITD KELQHLSGDS 480 NSVITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPPISQP EGLPLKVQDA SGKEWVFQFR 540 FWPNNNSRMY VLEGVTPCIQ SMHLQAGDTV SFSRIDPEGK LVMGFRKTKT QEQIFRQEEP 600 TKPANAAPNL PDVNVNVTAP DSSPNSSLVR PNKVNTENKD SSPVEQAASK IDKGGVAQKE 660 GSGTVRTSPG PVKRKATSIG PKIKRFRIDN EESMELKITW EEAQELLRPP LKAPSVVIVD 720 GHEFEEYEEP PVLGRKTYFV TDQSGENHQW AQCEDCSKWR KLPVDALLPS KWTCSDNKWD 780 PERTTCVSPQ EASMEELAEL IPIKAGAAKK AKLRMDTDSI DVSDGLDTLA NLAILGEGES 840 LPSQPTTKHP RHRPGCSCIV CIQPPSGKGP KHKQTCTCNV CMTVRRRFRT LMLRREKRAS 900 EKESDELPRK KEQGQSSESI PQDPLPASTS PSSTPQKVSG NGDDAEEAME HTMASSPMKN 960 QIDLNIQPER EDEQSPKSDA VGAMRLPREN AA

Sequence ? help Back to Top

Protein Sequence Length: 992 aa Download sequence

YFPAPPRFPR LPKTPPRPAP PRPPHRRPRV PAMSSSGPPN PIAPAHATVL TGTPMSVQPQ  60
PKPPPPPQQP SGSAAPPPSQ QPQPQHQRQQ QQQQGPPPAS LQQQPRICFN AHCKDPKSEG  120
PRRRGWRLRS GDYAELCDRC YGSFEHGTFC ETFHSEVAGW RKCEACGKRL HCGCIVSVHA  180
YALLDAGGVD CILCARKSYA AMAPSQMWST PTVHMSQNVA DRKDSYVKSW RPPTGQISSQ  240
WRQNHQLWNM STIQADLQQR LAYEFDRPSG SEKLPPGRTF IHAQEKKSDD MHDRPTTPAG  300
MGQIIRDRYA NGLGQQTSMD PTHSSTPYQR EGPNPNSLHD PSHHVGESDP LSSRKGIISD  360
GGSTVSTGFK LDPHHPSILK DDAASTLPTM GGYTITNYPP VPGRSDHLRI IPNNPQQPPT  420
TVPLSVVQKQ FYSHSVIEPN YQAQFRNGKP RMDPKARSEL LPRYWPRITD KELQHLSGDS  480
NSVITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPPISQP EGLPLKVQDA SGKEWVFQFR  540
FWPNNNSRMY VLEGVTPCIQ SMHLQAGDTV SFSRIDPEGK LVMGFRKTKT QEQIFRQEEP  600
TKPANAAPNL PDVNVNVTAP DSSPNSSLVR PNKVNTENKD SSPVEQAASK IDKGGVAQKE  660
GSGTVRTSPG PVKRKATSIG PKIKRFRIDN EESMELKITW EEAQELLRPP LKAPSVVIVD  720
GHEFEEYEEP PVLGRKTYFV TDQSGENHQW AQCEDCSKWR KLPVDALLPS KWTCSDNKWD  780
PERTTCVSPQ EASMEELAEL IPIKAGAAKK AKLRMDTDSI DVSDGLDTLA NLAILGEGES  840
LPSQPTTKHP RHRPGCSCIV CIQPPSGKGP KHKQTCTCNV CMTVRRRFRT LMLRREKRAS  900
EKESDELPRK KEQGQSSESI PQDPLPASTS PSSTPQKVSG NGDDAEEAME HTMASSPMKN  960
QIDLNIQPER EDEQSPKSDA VGAMRLPREN AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-141	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG030940.7