PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG029060.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 223aa MW: 24173 Da PI: 10.2741 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.5 | 1.1e-18 | 86 | 138 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t+eq++ Le F+++r++ + ++ +LA++lgL+ +qV vWFqNrRa++k TRIDC2BG029060.4 86 KRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHK 138 5689***********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 106.6 | 1.9e-34 | 85 | 174 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl++eqv+ LE sF+ee+kLe+ rKv+la eLgl+p+qvavWFqnrRAR+k+k +E+++++Lk+a+da ++++ +v +L+e+l TRIDC2BG029060.4 85 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHKSKLMEEEFAKLKHAHDAAILHKCHTYGQVLRLKERL 174 9*****************************************************************************999999999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
TQHNPPGLPS NLPTTPLLSS PQLPTASMDK QQVFGSSYVD MPFFAANGTA QGESRPRARR 60 RRRRAARCGR GDGDGGEMDG GGDLKKRRLT DEQVHGLELS FREERKLETG RKVHLAAELG 120 LDPKQVAVWF QNRRARHKSK LMEEEFAKLK HAHDAAILHK CHTYGQVLRL KERLGATEEE 180 VRRLRSAAGS HGASGDGGDA AGAVGACGGS PSSSFSTGTC QQH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 64 | RPRARRRRRR |
2 | 59 | 64 | RRRRRR |
3 | 59 | 67 | RRRRRRAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66700.1 | 4e-37 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG029060.4 |