PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG028430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HRT-like

Protein Properties

Length: 405aa MW: 44233 Da PI: 9.6223

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG028430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	55.9	6.8e-18	159	189	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+ledGs C + P++gRKRCe HKG+R+ TRIDC2BG028430.3 159 VCGVMLEDGSSCLEDPMEGRKRCELHKGRRV 189 7*****************************7 PP
2	HRT-like	28.6	2.4e-09	320	346	1	28
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKG 28 iCGv +++G Ck Pv gR RCeeH G TRIDC2BG028430.3 320 ICGVVTDNG-YCKLAPVTGRERCEEHGG 346 8*****9.6*************66 PP
3	HRT-like	48.2	1.8e-15	366	395	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CG++ +dGs+Ck+qP+ RKRC+ HKG+R TRIDC2BG028430.3 366 VCGARASDGSPCKNQPIARRKRCALHKGQR 395 7****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MCAEMGSKKA AEKTEAQLLG VFDYAWNKLQ NGVCRREEIL LKLEQGSHRL SLLGRVQHFK 60 QRVFGEKAGI KINSSGSVEI SSGSMKNMLP RVRRFVGFRP RLVNSGDGLN EAIDIHRKCT 120 PQTNTAGNKQ ARRKSEGYKV KKIDVIKRQT VPTREAEAVC GVMLEDGSSC LEDPMEGRKR 180 CELHKGRRVR VAYSRKVSSS SSTCQVAIPT VESIPQQTAN PSKPDQAWQT NADQSKNLST 240 NVKEPSQQRN SLEAKEMKIG EAPTEDEAYG TSHAESQFHQ DEPVGRKWFE LLKAQKSASA 300 PSLRGQGCQT REANDDASAI CGVVTDNGYC KLAPVTGRER CEEHGGIEVT GASSAPCSGR 360 SGWPSVCGAR ASDGSPCKNQ PIARRKRCAL HKGQRGCCAS TPSVK

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MCAEMGSKKA AEKTEAQLLG VFDYAWNKLQ NGVCRREEIL LKLEQGSHRL SLLGRVQHFK  60
QRVFGEKAGI KINSSGSVEI SSGSMKNMLP RVRRFVGFRP RLVNSGDGLN EAIDIHRKCT  120
PQTNTAGNKQ ARRKSEGYKV KKIDVIKRQT VPTREAEAVC GVMLEDGSSC LEDPMEGRKR  180
CELHKGRRVR VAYSRKVSSS SSTCQVAIPT VESIPQQTAN PSKPDQAWQT NADQSKNLST  240
NVKEPSQQRN SLEAKEMKIG EAPTEDEAYG TSHAESQFHQ DEPVGRKWFE LLKAQKSASA  300
PSLRGQGCQT REANDDASAI CGVVTDNGYC KLAPVTGRER CEEHGGIEVT GASSAPCSGR  360
SGWPSVCGAR ASDGSPCKNQ PIARRKRCAL HKGQRGCCAS TPSVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-15	HRT-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG028430.3