PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG028050.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 79aa MW: 8319.62 Da PI: 8.8127 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 50.3 | 7e-16 | 19 | 78 | 1 | 55 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeere 55 +C++C+vlr++C++ Cvl+p++ +++q +++ +++k+FG++ ++++l+a+pe++r+ TRIDC2BG028050.2 19 SCNGCRVLRKGCNEACVLRPCLlwieaADAQGHATLFAAKFFGRAGLMSFLTAVPEQQRP 78 6*********************9998666778**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
MRGSERAAVS ASASTSGMSC NGCRVLRKGC NEACVLRPCL LWIEAADAQG HATLFAAKFF 60 GRAGLMSFLT AVPEQQRPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67420.1 | 6e-35 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG028050.2 |