PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG027550.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 396aa MW: 43083.7 Da PI: 6.8319

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG027550.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.7	6.4e-25	164	214	2	54
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 dDgynWrKYGqK vkg ++prsYY+Ct +Cpv+k+ve+sa d+++++i+Y+g TRIDC2BG027550.2 164 DDGYNWRKYGQKAVKGGKYPRSYYKCTL-NCPVRKNVEHSA-DGRIIKIIYRG 214 8***********************97.7*******.*******98 PP
2	WRKY	102.6	2.3e-32	290	348	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct++gC vkk++ers+e+p++v++tYeg+H+h+ TRIDC2BG027550.2 290 LDDGYRWRKYGQKVVRGNPHPRSYYKCTYQGCDVKKHIERSSEEPHAVITTYEGKHTHD 348 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
ALGFFGGSLA QLPSPPPLCG TALLGYPQDN FDVFHEQDLA QLAAQVAQKK ELREKQGAGL 60 HHKIGPQLAF SKYSILDQVD NSSSFSLATS VLTPQHVSSS VGAASMQGQT LPSHTGSGSV 120 NTGPTGVLQV LQDSSTTLDS INTGSTGVLE ALQGSSITLD RPADDGYNWR KYGQKAVKGG 180 KYPRSYYKCT LNCPVRKNVE HSADGRIIKI IYRGCQGYYG KPITPNGMMT DVLLPTKEEG 240 DEQLSSLSDI REGDGEIRTV DGDDGDADAN ERNAPGQKII VSTTSDVDLL DDGYRWRKYG 300 QKVVRGNPHP RSYYKCTYQG CDVKKHIERS SEEPHAVITT YEGKHTHDVP ESRNRSQATG 360 QHHCKEQTYS EQSAASFCSS SEKRKYGTAI LNDLAF

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

ALGFFGGSLA QLPSPPPLCG TALLGYPQDN FDVFHEQDLA QLAAQVAQKK ELREKQGAGL  60
HHKIGPQLAF SKYSILDQVD NSSSFSLATS VLTPQHVSSS VGAASMQGQT LPSHTGSGSV  120
NTGPTGVLQV LQDSSTTLDS INTGSTGVLE ALQGSSITLD RPADDGYNWR KYGQKAVKGG  180
KYPRSYYKCT LNCPVRKNVE HSADGRIIKI IYRGCQGYYG KPITPNGMMT DVLLPTKEEG  240
DEQLSSLSDI REGDGEIRTV DGDDGDADAN ERNAPGQKII VSTTSDVDLL DDGYRWRKYG  300
QKVVRGNPHP RSYYKCTYQG CDVKKHIERS SEEPHAVITT YEGKHTHDVP ESRNRSQATG  360
QHHCKEQTYS EQSAASFCSS SEKRKYGTAI LNDLAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	7e-64	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG027550.2