PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG023020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 176aa MW: 18535.5 Da PI: 7.8885 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31 | 5.7e-10 | 5 | 30 | 20 | 47 |
TTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqky 47 G++ W+ Ia++++ gRt++++k++w+++ TRIDC2BG023020.1 5 GNK-WSQIAAHLP-GRTDNEVKNFWNSF 30 788.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
HSIRGNKWSQ IAAHLPGRTD NEVKNFWNSF IKKKLRQRGI DPATHEHKPL DPAAPAAPAT 60 PVSRNAVFSE NELILSSPVG GPHMPPLVSA ESYVYSRGST DGAGGAHAAV GGCSDDGSLS 120 SLSGYNNNQT ADFAGYLDAD ALHGGVIPSA VAELEHKHNP RGDHWLKGSK LMGGRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 4e-20 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG023020.1 |