PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023010.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 350aa MW: 37120.1 Da PI: 6.7256

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023010.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l + ++++G+g+W++I++ g+ R++k+c++rw +yl TRIDC2BG023010.2 14 RGLWSPEEDEKLMNHIAKYGNGCWSSIPKIAGLERCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.9	1.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++l+++++ lG++ W+ Ia+ ++ gRt++++k++w+++ TRIDC2BG023010.2 67 RGAFSQEEEDLIIHLHSILGNK-WSQIAAQLP-GRTDNEVKNFWNSF 111 89******************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSI PKIAGLERCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT DNEVKNFWNS FIKKKLRQRG 120 IDPATHKPLA PASAPPAATP VSRSAVFSEA ELILSSPVGG QHMPPLVSAE SYVYSRGSMD 180 GAGGVVGGCS DDGSLSSLSG YNNNNQTADA LHGGVIPSVS SSSTLNSMAG VSPGGAANTN 240 ATTDELCCNN NPSNSGSGFE SSTTQSSSNH HLPWLELGSI SSCTEDASGA GAGADHYGAA 300 LDELKWSDYV FDGGYQQYHQ QGQCIYGDSK VAADAAAAQF DAHGLGINWC

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSI PKIAGLERCG KSCRLRWINY  60
LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT DNEVKNFWNS FIKKKLRQRG  120
IDPATHKPLA PASAPPAATP VSRSAVFSEA ELILSSPVGG QHMPPLVSAE SYVYSRGSMD  180
GAGGVVGGCS DDGSLSSLSG YNNNNQTADA LHGGVIPSVS SSSTLNSMAG VSPGGAANTN  240
ATTDELCCNN NPSNSGSGFE SSTTQSSSNH HLPWLELGSI SSCTEDASGA GAGADHYGAA  300
LDELKWSDYV FDGGYQQYHQ QGQCIYGDSK VAADAAAAQF DAHGLGINWC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	2e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023010.2