PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG023010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 271aa    MW: 27967.4 Da    PI: 4.975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG023010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding316e-102301747
                      HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqky 47
                        lG++ W+ Ia+ ++ gRt++++k++w+++
  TRIDC2BG023010.1  2 SILGNK-WSQIAAQLP-GRTDNEVKNFWNSF 30
                      679***.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
HSILGNKWSQ IAAQLPGRTD NEVKNFWNSF IKKKLRQRGI DPATHKPLAP ASAPPAATPV  60
SRSAVFSEAE LILSSPVGGQ HMPPLVSAES YVYSRGSMDG AGGVVGGCSD DGSLSSLSGY  120
NNNNQTADAL HGGVIPSVSS SSTLNSMAGV SPGGAANTNA TTDELCCNNN PSNSGSGFES  180
STTQSSSNHH LPWLELGSIS SCTEDASGAG AGADHYGAAL DELKWSDYVF DGGYQQYHQQ  240
GQCIYGDSKV AADAAAAQFD AHGLGINWCL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.33e-21MYB family protein