PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG022850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 386aa MW: 42008.5 Da PI: 5.5292

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG022850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	110	1.7e-34	83	182	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ + sg +sf+++h+q ife TRIDC2BG022850.3 83 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRlRGSGAAFSFRSPHEQAIFE 175 79**********************99877778***********************************8889************ PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC2BG022850.3 176 IARNIWR 182 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
PIPNPISGPM LPAGDGSSAA VAALSFTDAD GDDYSEDGDF TGVPFLEPPD PSLPDPTSSS 60 ATALLPAGGS GGQASSGGER RPLFQRLWTE EDEIVILRGF AEFTAARGTA FASHQYDTDP 120 FYEDMRRRLQ LDFSKSQLVE KLRRLKRKYR NCVSRLRGSG AAFSFRSPHE QAIFEIARNI 180 WRPTNKHGRD PSADSDDEEA VVAAAAVAAT SVPANTSPNG EVKSPSGRQR RRRRSVESAP 240 TAPAAVPATI LVQPPQPVQV QMPVSVPVKM DDSLPALPQA PMPVTVTMEG SEPLKFPVMS 300 PQSGVVDVEK NFLTPMFKEM IHAVINMGSS PFGMKLPEPP HGLPMEGEKW RNQRILELEV 360 YLKRIELLQD QVKATLEELK SSTPRT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

PIPNPISGPM LPAGDGSSAA VAALSFTDAD GDDYSEDGDF TGVPFLEPPD PSLPDPTSSS  60
ATALLPAGGS GGQASSGGER RPLFQRLWTE EDEIVILRGF AEFTAARGTA FASHQYDTDP  120
FYEDMRRRLQ LDFSKSQLVE KLRRLKRKYR NCVSRLRGSG AAFSFRSPHE QAIFEIARNI  180
WRPTNKHGRD PSADSDDEEA VVAAAAVAAT SVPANTSPNG EVKSPSGRQR RRRRSVESAP  240
TAPAAVPATI LVQPPQPVQV QMPVSVPVKM DDSLPALPQA PMPVTVTMEG SEPLKFPVMS  300
PQSGVVDVEK NFLTPMFKEM IHAVINMGSS PFGMKLPEPP HGLPMEGEKW RNQRILELEV  360
YLKRIELLQD QVKATLEELK SSTPRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	2e-35	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG022850.3