PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG022850.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GeBP

Protein Properties

Length: 349aa MW: 38290.2 Da PI: 6.0847

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG022850.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	110.2	1.4e-34	67	166	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkife 90 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ + sg +sf+++h+q ife TRIDC2BG022850.2 67 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRlRGSGAAFSFRSPHEQAIFE 159 79**********************99877778***********************************8889************ PP DUF573 91 lskkiWg 97 +++ iW+ TRIDC2BG022850.2 160 IARNIWR 166 ****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
SSAAVAALSF TDADGDDYSE DGDFTGVPFL EPPDPSLPDP TSSSATALLP AGGSGGQASS 60 GGERRPLFQR LWTEEDEIVI LRGFAEFTAA RGTAFASHQY DTDPFYEDMR RRLQLDFSKS 120 QLVEKLRRLK RKYRNCVSRL RGSGAAFSFR SPHEQAIFEI ARNIWRPTNK HGRDPSADSD 180 DEEAVVAAAA VAATSVPANT SPNGEVKSPS GRQRRRRRSV ESAPTAPAAV PATILVQPPQ 240 PVQVQMPVSV PVKMDDSLPA LPQAPMPVVD VEKNFLTPMF KEMIHAVINM GSSPFGMKLP 300 EPPHGLPMEG EKWRNQRILE LEVYLKRIEL LQDQVKATLE ELKSSTPRT

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

SSAAVAALSF TDADGDDYSE DGDFTGVPFL EPPDPSLPDP TSSSATALLP AGGSGGQASS  60
GGERRPLFQR LWTEEDEIVI LRGFAEFTAA RGTAFASHQY DTDPFYEDMR RRLQLDFSKS  120
QLVEKLRRLK RKYRNCVSRL RGSGAAFSFR SPHEQAIFEI ARNIWRPTNK HGRDPSADSD  180
DEEAVVAAAA VAATSVPANT SPNGEVKSPS GRQRRRRRSV ESAPTAPAAV PATILVQPPQ  240
PVQVQMPVSV PVKMDDSLPA LPQAPMPVVD VEKNFLTPMF KEMIHAVINM GSSPFGMKLP  300
EPPHGLPMEG EKWRNQRILE LEVYLKRIEL LQDQVKATLE ELKSSTPRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	2e-35	GeBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG022850.2