PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018540.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 478aa MW: 54466 Da PI: 10.0535

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018540.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45.6	1.2e-14	53	104	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR kek+ TRIDC2BG018540.7 53 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKEKR 104 66899**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
SPTPASHALR LHRRLRSSSS GLRCLRPVRG LWQLGFQMMA KGFLAKSDNA GTKKSPLQIQ 60 MLESFYSEVQ YPKPEDVTEY AASVGLTYNQ VRIWFKERRR KEKRHMEAAE VHMETQASAR 120 SNWPRCSSSR SSNSSQSPTQ DTTGHHSYQD QSVLKKRKIM SPTAQRSTLP FENNDPVRKH 180 GKGKGLMTVW HAMYSQTAEI QDCSSFIDES GCLRSLRPFE DCGRKLAQVQ RQTSPQKKVN 240 KKSRPPPSKR KVPCGRVTDL TEHPPVECHL SVDESESSEL RTEQATLVDD EELELSELQA 300 GPNPLRCSAH ISSTGRHGCP LCKDLLARFP PPSVRMKQLF PTKPWESSPE MVKKLFQVVR 360 FVYTHFGSLD VHPFTFDEFA QAFHDKDSSL LGKVHVSLLK LLMLNTERGS GSVFVPRSSK 420 DSRFLSFLNF VREQEFDVNF WIKSLNSLTW VEILRQVLVA SGFGSDHHML NRNFFNKV

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

SPTPASHALR LHRRLRSSSS GLRCLRPVRG LWQLGFQMMA KGFLAKSDNA GTKKSPLQIQ  60
MLESFYSEVQ YPKPEDVTEY AASVGLTYNQ VRIWFKERRR KEKRHMEAAE VHMETQASAR  120
SNWPRCSSSR SSNSSQSPTQ DTTGHHSYQD QSVLKKRKIM SPTAQRSTLP FENNDPVRKH  180
GKGKGLMTVW HAMYSQTAEI QDCSSFIDES GCLRSLRPFE DCGRKLAQVQ RQTSPQKKVN  240
KKSRPPPSKR KVPCGRVTDL TEHPPVECHL SVDESESSEL RTEQATLVDD EELELSELQA  300
GPNPLRCSAH ISSTGRHGCP LCKDLLARFP PPSVRMKQLF PTKPWESSPE MVKKLFQVVR  360
FVYTHFGSLD VHPFTFDEFA QAFHDKDSSL LGKVHVSLLK LLMLNTERGS GSVFVPRSSK  420
DSRFLSFLNF VREQEFDVNF WIKSLNSLTW VEILRQVLVA SGFGSDHHML NRNFFNKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	103	RRRKEK
2	155	184	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	5e-54	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018540.7