PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG016730.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 674aa MW: 79113.5 Da PI: 7.0393

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG016730.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.6e-25	32	126	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA e GFsvrk + + + n++i+ +++vCs+eg ree++ k ++++r++r+ tr+gCkak+++ + +g+w v+++ eHnH+l TRIDC2BG016730.2 32 KFYNKYALEKGFSVRKGYVEWDEANEKIILKKLVCSREGCREEKHMKrkrEDRKRKPRNITRVGCKAKFVIARVAkTGRWFVKDFIDEHNHPL 124 6***************************************99988777889999***********99988**************9 PP FAR1 90 ap 91 ap TRIDC2BG016730.2 125 AP 126 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MQEDMADVSA ECMAEYDDVV SRMFDSEEEG FKFYNKYALE KGFSVRKGYV EWDEANEKII 60 LKKLVCSREG CREEKHMKRK REDRKRKPRN ITRVGCKAKF VIARVAKTGR WFVKDFIDEH 120 NHPLAPRDLA CFLRSHRRIS DEQKADIIEM ESVGIRKHKI MDVLCMQYGG YDHVGCMTRD 180 IYNFCHRYKQ ETVAAGDAQT VIRHMMARQE RDPDYFFKYL VDKDGHLKGL FWSDTQSRLD 240 YEAFGDVVVF DSTYRTNKYN LPFVPFVGLN HHRNTVIFGC EIISHETNEA YEWMLRTFSE 300 AMSQKHSISV ITDGDLAMQR AVRVVWPDSY HRLCVWHIQQ NIVRHLHDDE VREEFRSFIY 360 DSSSTVEHER KWIEFLRRNE VTSEESWLHQ MYQMRKLWCA PYLVGRCFLG LSSNQRSESL 420 NSVLHTHLEG KMTLFDMLEH YERCLSGRRL NEAILDIVAL QSVPFTDADA SSLEKHAARV 480 FTPCMFQLVR WSINAVSKCV ISEILDAWEL TTYVVAKIDR REKKFEVRCE MNEGSLYMIS 540 CSCRKLECLG TPCSHIFYIL GIRQVELLPR CCVPMRWTMS AKSAFPPIRK SEMYDYSASL 600 VRYRELRNLS HAACFRACQS SEEYQRLEMV LSEQDGNKES SRGQEECIRF GPVLPQTTEI 660 DCGDLEKVLD PVHV

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MQEDMADVSA ECMAEYDDVV SRMFDSEEEG FKFYNKYALE KGFSVRKGYV EWDEANEKII  60
LKKLVCSREG CREEKHMKRK REDRKRKPRN ITRVGCKAKF VIARVAKTGR WFVKDFIDEH  120
NHPLAPRDLA CFLRSHRRIS DEQKADIIEM ESVGIRKHKI MDVLCMQYGG YDHVGCMTRD  180
IYNFCHRYKQ ETVAAGDAQT VIRHMMARQE RDPDYFFKYL VDKDGHLKGL FWSDTQSRLD  240
YEAFGDVVVF DSTYRTNKYN LPFVPFVGLN HHRNTVIFGC EIISHETNEA YEWMLRTFSE  300
AMSQKHSISV ITDGDLAMQR AVRVVWPDSY HRLCVWHIQQ NIVRHLHDDE VREEFRSFIY  360
DSSSTVEHER KWIEFLRRNE VTSEESWLHQ MYQMRKLWCA PYLVGRCFLG LSSNQRSESL  420
NSVLHTHLEG KMTLFDMLEH YERCLSGRRL NEAILDIVAL QSVPFTDADA SSLEKHAARV  480
FTPCMFQLVR WSINAVSKCV ISEILDAWEL TTYVVAKIDR REKKFEVRCE MNEGSLYMIS  540
CSCRKLECLG TPCSHIFYIL GIRQVELLPR CCVPMRWTMS AKSAFPPIRK SEMYDYSASL  600
VRYRELRNLS HAACFRACQS SEEYQRLEMV LSEQDGNKES SRGQEECIRF GPVLPQTTEI  660
DCGDLEKVLD PVHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	KREDRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-93	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG016730.2