PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG014870.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 569aa    MW: 60082.9 Da    PI: 8.8994
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG014870.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.78.4e-08238258526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C ++ar G+Ck G+ C+F Hg
  TRIDC2BG014870.3 238 PCLYYAR-GYCKNGSACRFVHG 258
                       8******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    
MDAYEATKVV FARIQGLDPD HAAKIMGLLL IQDHGEKEMI RLAFGPEALL LAVMAKARKD  60
LGLLPGSGPG TPTSAAHSPF MLSRQNSGRG GGCGGGTAPS PLSVSSPSSW APPPVFSRSN  120
SVSNGAAEEM AGVGEEQLMS PANGGGGPQS PFFGGDSSLI LDELHLQDQL AFLSEGGMGG  180
GGGRQLPLFD SGECRSPSGD GGLFPYGAGW ANGGPGHRRS ASVSELCFGG SDGLGWKPCL  240
YYARGYCKNG SACRFVHGGL PDDLAGAKMD QAAVEQQCQD FLLRSKSQRL AAAAGFAYSP  300
TGSLPGSPSA ASKCLSLLLK QQQQQNEGQS GADAGRRRGA QVHEPSPSRP RRLREHDEPG  360
VPADLPHLPG GQHLPRGGRL QLLQHLRPCP RRAHPLPAEA HVRIRHLRLP GDGEADPGQG  420
QPALHLRRAR ARQALQGEGQ GPRQVQEAAG REGGLLRLRV SHRAGRQRPL RSAPDCARML  480
QHSNSANEML LRRKLEEQQQ AVELQQAIEL QSRRLMGLQL LDLKTRSAAA PTPIGKPFSP  540
THTTAATPTL ESPPDSDAVL LTFAVLILC