PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG011160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 175aa MW: 18537 Da PI: 9.2045 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 46.6 | 1e-14 | 106 | 148 | 1 | 43 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvl 43 +CaaCk+l r+C+++Cv+ pyfp+ +p++fa vhk+F ++ TRIDC2BG011160.1 106 PCAACKLLLRRCSAGCVFVPYFPSGEPHRFASVHKVFALATSA 148 7************************************987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
PRSILLTPRH RAPLFSRIAA LPSTLPWLSR LQQRLDLLVQ EGDESPDPAS AGTDPVAARP 60 DAPDPVAATW CRSPVRSSSA NWMEDVGRTE VQACGGREGG WGGASPCAAC KLLLRRCSAG 120 CVFVPYFPSG EPHRFASVHK VFALATSASS SSKVFGAAAP RRPDADPVAN GGRHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 9e-16 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG011160.1 |