PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG010630.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 245aa MW: 27352.3 Da PI: 9.5868 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.8 | 6e-09 | 193 | 242 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r++WT+ + l+++v+++G g+Wk I + + R+ + k++++++ TRIDC2BG010630.3 193 RKKWTEIQERTLIEGVAKYGRGNWKDIKIAYPdvfQDRSTVDMKDKFRNL 242 789********************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
RIASAGALDT WANADHDKRK KLRRLVGEAT EREILGKLGQ DPSKAPQVDE AANAPSTSGA 60 NEGDRAQQDD EAHLGREKGE ANHAQEDCAR HQQEPVERTT DARVPEKPVT SAAVKGKEQA 120 TSSHVTGQAA PDHNKSHPVA GSKPSLMERK PSAIVYQWDD SGDSDSERPP HQRRLPTYER 180 KMRPPPAIPH KTRKKWTEIQ ERTLIEGVAK YGRGNWKDIK IAYPDVFQDR STVDMKDKFR 240 NLGRH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 25 | DKRKKLRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15720.1 | 3e-11 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG010630.3 |