PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG010630.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 279aa    MW: 30993.3 Da    PI: 6.9271
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG010630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.4e-09227276147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r++WT+  +  l+++v+++G g+Wk I    +   + R+  + k++++++
  TRIDC2BG010630.1 227 RKKWTEIQERTLIEGVAKYGRGNWKDIKIAYPdvfQDRSTVDMKDKFRNL 276
                       789********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
EHLAAVGDDV AALRRLVDAE WESLPPSALE LEADRIASAG ALDTWANADH DKRKKLRRLV  60
GEATEREILG KLGQDPSKAP QVDEAANAPS TSGANEGDRA QQDDEAHLGR EKGEANHAQE  120
DCARHQQEPV ERTTDARVPE KPVTSAAVKG KEQATSSHVT GQAAPDHNKS HPVAGSKPSL  180
MERKPSAIVY QWDDSGDSDS ERPPHQRRLP TYERKMRPPP AIPHKTRKKW TEIQERTLIE  240
GVAKYGRGNW KDIKIAYPDV FQDRSTVDMK DKFRNLGRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15159DKRKKLRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.14e-11MYB_related family protein