PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG008900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 306aa    MW: 33658.6 Da    PI: 8.6987
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG008900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.2e-151462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l++   ++G+g +W + +++ g++R++k+c++rw++yl
  TRIDC2BG008900.1 14 KGPWSPEEDAKLKEFMDKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62
                      79*********************************************97 PP
2Myb_DNA-binding35.23e-1169111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T+ Ed  +    +  G++ W+ Ia+ ++ gRt++++k++w++
  TRIDC2BG008900.1  69 GEFTEHEDRVICSMYASIGSR-WSIIASQLP-GRTDNDIKNYWNT 111
                       78*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGRAPCCDKN NVKKGPWSPE EDAKLKEFMD KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN  60
YLRPNIKHGE FTEHEDRVIC SMYASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKLMGS  120
TTMAGAGPPP RAPRQNHHQH RPVLLPYSSS PHSNYSNFFP GAGALLQQSA EPLTLQPQDH  180
YMLGSSASLN PMANNNGASA VQLQMLHATA AHRQLQVKEE CGSGGAMIAF GCGDQQSCSS  240
SDATQYAGGQ YVHGGRHHGK EMSFDNNNGY SAYGMYGAGA GAVEQEHKLS FQLQQQQAQL  300
DYSYEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.14e-77MYB family protein