PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG008160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 226aa    MW: 25047.2 Da    PI: 5.4321
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG008160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.68.8e-11164217348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 
                        WTteE   lvd+ +++Gg++W++I ++          + Rt +++k++w++++
  TRIDC2BG008160.4 164 HWTTEEVTALVDGLEEFGGRRWSAIKKKYFpkpdrtdqTDRTTENLKDKWRNLR 217
                       5************************988766*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
YETMLIIKGA RAETEDDLSQ LFEDFGINGS QLAASFGPPT FVMDANLTSD AAPVPSPLRV  60
GPSAALTVDL IVPTLELVDE AVLAAPLSPS AYMIEKNLTH DEDPAATLPE SVRRCKRGPR  120
KRRIPLCTDQ GWFLGDHFGG TSCLRDAPSA SEGRNRGLRT NGPHWTTEEV TALVDGLEEF  180
GGRRWSAIKK KYFPKPDRTD QTDRTTENLK DKWRNLRKSY TKEDTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.11e-09MYB_related family protein