PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG008160.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 156aa    MW: 17980.3 Da    PI: 10.4128
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG008160.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.4e-1172125348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 
                        WTteE   lvd+ +++Gg++W++I ++          + Rt +++k++w++++
  TRIDC2BG008160.3  72 HWTTEEVTALVDGLEEFGGRRWSAIKKKYFpkpdrtdqTDRTTENLKDKWRNLR 125
                       5************************988766*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MIEKNLTHDE DPAATLPESV RRCKRGPRKR RIPLCTDQGW FLGDHFGGTS CLRDAPSASE  60
GRNRGLRTNG PHWTTEEVTA LVDGLEEFGG RRWSAIKKKY FPKPDRTDQT DRTTENLKDK  120
WRNLRKSYTG SAERRYYLVL PDHLIQRLKR LAATGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.23e-12MYB_related family protein