PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG008160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 300aa    MW: 33166.4 Da    PI: 8.4592
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG008160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-10216269348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 
                        WTteE   lvd+ +++Gg++W++I ++          + Rt +++k++w++++
  TRIDC2BG008160.2 216 HWTTEEVTALVDGLEEFGGRRWSAIKKKYFpkpdrtdqTDRTTENLKDKWRNLR 269
                       5************************988766*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
ISFKSLGRLP GSSDPQPPRL LSLLSSRLNS TNSSAAGWRI LDTNQQPMGT EFYETMLIIK  60
GARAETEDDL SQLFEDFGIN GSQLAASFGP PTFVMDANLT SDAAPVPSPL RVGPSAALTV  120
DLIVPTLELV DEAVLAAPLS PSAYMIEKNL THDEDPAATL PESVRRCKRG PRKRRIPLCT  180
DQGWFLGDHF GGTSCLRDAP SASEGRNRGL RTNGPHWTTE EVTALVDGLE EFGGRRWSAI  240
KKKYFPKPDR TDQTDRTTEN LKDKWRNLRK SYTGSAERRY YLVLPDHLIQ RLKRLAATGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.11e-11MYB_related family protein