PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG004970.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 214aa    MW: 23327.2 Da    PI: 7.3436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG004970.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.6e-1557106355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y GVr ++ +gr++AeIrd s++g  +r++lg+f tae Aa a+++a+++ +g
  TRIDC2BG004970.1  57 YIGVRARP-WGRFAAEIRD-STRG-GARVWLGTFATAEAAAMAYDQAALSSRG 106
                       88******.**********.3433.4**********************98665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDNHGDMCYY SGVGMGAAAD PSCSSTSYSS LDSFPSDLSS GETIEEERRR PKKPAAYIGV  60
RARPWGRFAA EIRDSTRGGA RVWLGTFATA EAAAMAYDQA ALSSRGAATA LNFPVERVKE  120
SLYALGATAT GMGGSPVLAL KRRHSKRKRR SKAEIANDAA TCTRRRSKTM ATQERFIVEL  180
EDLGVDYLDE LLRITLELED LGADYLDELL RITS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14754ERRRPKKP
2142148RRHSKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-25ERF family protein