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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG081530.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | GATA | ||||||||
| Protein Properties | Length: 195aa MW: 21361.2 Da PI: 9.5535 | ||||||||
| Description | GATA family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GATA | 40.7 | 3.3e-13 | 8 | 42 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg +p WR+gp ++ LCnaCG ++rkkg+
TRIDC2AG081530.1 8 CCHCGIMGSPIWRNGPPEKPVLCNACGTRWRKKGT 42
99**************88888************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 195 aa Download sequence |
MVKKEGPCCH CGIMGSPIWR NGPPEKPVLC NACGTRWRKK GTLDNYTPTR RPQDAEAERK 60 QHKKKPVRRI VKKEPSSHHN LGKTGDAADT FSNPSGFGSA ASYSGSAQSH AWESLVPSRK 120 RTCVARRRKP SSLETLAEDL NSIMHQEKLC SGSGVCTIPG SSEEDLLIYH SETAVGSFEI 180 GYGSMLLTHP FKHAS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17570.1 | 5e-36 | GATA family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG081530.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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