PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG080920.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 422aa    MW: 44366.7 Da    PI: 8.6595
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG080920.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.82.2e-06179202123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       ++CpdCg +F r ++L+ H+ t H
  TRIDC2AG080920.2 179 FPCPDCGDVFVRAESLHLHQATrH 202
                       89******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
GNSATAAAAD SPSYRLALRS LFSCRNSHAA QHQQHNQRCK KKSKKQTQLG CSASICKLRD  60
ASPRRVTLHR PPAEEEPPSG AATGAGEPCK RRASVSGAGE RRVKKPLQQP QQGQGNEAAG  120
AVVVGSSSRH WGSSTASSSS STAGGGGSSF RLRRLSGCYE CHMVVDPAGG GTSMRAAIFP  180
CPDCGDVFVR AESLHLHQAT RHAVSELGPE DTSRNIIEII FQSSWLKKQS PVCAVDRILK  240
VHNAPATLAR FEAYRDAVKA RARGGRPGAG RCTADGNELL RFHCAALSCS LGAGGATHLC  300
DAASSSCAAC GIVRDGFKFR APGVRTMATS GRAHDDAVTV GGEEGEGGEG ERRRAMLVCR  360
VIAGRVKRRC EGTAEEAEAS PSAEEEEYDS VAGTAGVYSS LDELEVFNPT AILPCFVVVY  420
KA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.14e-65C2H2 family protein