PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG077780.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 298aa    MW: 31236.2 Da    PI: 10.2184
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG077780.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-072369245
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45
                      g WT e  + + +a ++   g     W++Ia  +g g+t++++k ++ 
  TRIDC2AG077780.4 23 GGWTWEQNKAFENALALVDLGegeaVWNKIADAVG-GKTAEEIKRHYE 69
                      56*************99888888************.**********95 PP
2Myb_DNA-binding38.82.2e-12134177447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT++E+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC2AG077780.4 134 WTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 177
                       *****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
AVWNNMAGVV EVKKGSGSGS GPGGWTWEQN KAFENALALV DLGEGEAVWN KIADAVGGKT  60
AEEIKRHYEL LVADVDAIEA GRVPLPVYTD GGSPEEGGSG GKKGRGRVGG GRGGHGQKVS  120
SKSVKREGQK GILWTEDEHR LFLLGLEKYG KGDWRSISRN FVISRTPTQV ASHAQKYFIR  180
LNSMNRERRR SSIHDITSVN GEASAAQGPI TGTNGQAAVP GKSPKQSPHQ PGNLPPGVDA  240
FGTTIGQPVG GPLVSAVGTP VTLPVAAPPH MGYAMHAPVP GTVVPRAPMY PMPPPPSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-82MYB family protein