PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG077780.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 179aa    MW: 19114.7 Da    PI: 10.9578
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG077780.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding414.5e-131458347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT++E+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC2AG077780.3 14 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 58
                      6*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
SSKSAEQERR KGIAWTEDEH RLFLLGLEKY GKGDWRSISR NFVISRTPTQ VASHAQKYFI  60
RLNSMNRERR RSSIHDITSV NGEASAAQGP ITGTNGQAAV PGKSPKQSPH QPGNLPPGVD  120
AFGTTIGQPV GGPLVSAVGT PVTLPVAAPP HMGYAMHAPV PGTVVPRAPM YPMPPPPSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-67MYB family protein