PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG077780.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 59aa MW: 6636.15 Da PI: 3.881 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.3 | 8.5e-09 | 3 | 49 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45 g WT e ++ + +a + + W++Ia + g+t+++++ ++ TRIDC2AG077780.2 3 GGWTREQEKAFENALATVDEEegeaMWDKIADAVE-GKTPEEVRRHYE 49 67*****************99**************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 59 aa Download sequence |
GSGGWTREQE KAFENALATV DEEEGEAMWD KIADAVEGKT PEEVRRHYEL LVEDVDGIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 6e-17 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG077780.2 |