PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG077780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 294aa    MW: 30938.5 Da    PI: 6.9804
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG077780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.23.3e-071965245
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwq 45
                      g WT e ++ + +a +    +     W++Ia  +  g+t+++++ ++ 
  TRIDC2AG077780.1 19 GGWTREQEKAFENALATVDEEegeaMWDKIADAVE-GKTPEEVRRHYE 65
                      67*****************99**************.**********95 PP
2Myb_DNA-binding38.82.1e-12130173447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT++E+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC2AG077780.1 130 WTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 173
                       *****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAAEEASSSG GAGGEEGSGG WTREQEKAFE NALATVDEEE GEAMWDKIAD AVEGKTPEEV  60
RRHYELLVED VDGIEAGRVP LPVYTDGGSP EEGGSGGKKG RGRVGGGRGG HGQKVSSKSV  120
KREGQKGILW TEDEHRLFLL GLEKYGKGDW RSISRNFVIS RTPTQVASHA QKYFIRLNSM  180
NRERRRSSIH DITSVNGEAS AAQGPITGTN GQAAVPGKSP KQSPHQPGNL PPGVDAFGTT  240
IGQPVGGPLV SAVGTPVTLP VAAPPHMGYA MHAPVPGTVV PRAPMYPMPP PPSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-84MYB family protein