PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG077000.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 343aa MW: 37769.4 Da PI: 6.9142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG077000.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde+l+ ++++G g+W++ +++ g+ R++k+c++rw +yl TRIDC2AG077000.9 14 KGPWTSEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50	6.9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l TRIDC2AG077000.9 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRSPCCDKV GLKKGPWTSE EDEKLLAHIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSRRT DNEIKNYWNT HLKKRLAKMG 120 IDHVTHKATN GAPVGTAASL NHMAQWESAR LEAEGRLARE SRMRTAASTP TSIPLHPINL 180 PEPTTPPCLG MLQPWQGAKL DLESPTSTLT FIGNNNSVSL GASESNSAMW KLRSDDPECE 240 ENSVHKFLRE QQMQGLEGEE RGRHIIGCEE PWFQGTVGVG AGFTDMLHDA LDCWGESSNG 300 QAELSGQVSG DGESGSSSYW SGILGMVVTS ELPPSHPHPP AFL

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRSPCCDKV GLKKGPWTSE EDEKLLAHIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSRRT DNEIKNYWNT HLKKRLAKMG  120
IDHVTHKATN GAPVGTAASL NHMAQWESAR LEAEGRLARE SRMRTAASTP TSIPLHPINL  180
PEPTTPPCLG MLQPWQGAKL DLESPTSTLT FIGNNNSVSL GASESNSAMW KLRSDDPECE  240
ENSVHKFLRE QQMQGLEGEE RGRHIIGCEE PWFQGTVGVG AGFTDMLHDA LDCWGESSNG  300
QAELSGQVSG DGESGSSSYW SGILGMVVTS ELPPSHPHPP AFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-101	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG077000.9