PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG076560.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 390aa MW: 42212.5 Da PI: 10.5252

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG076560.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.3	7.1e-17	67	153	2	72
trihelix 2 WtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 Wt +e+l Li+a+r +++r g +++++W++v ++++ g+ rs++qC++kw+nl ++ykk+++ e +r+ TRIDC2AG076560.3 67 WTMHETLILITAKRLDDDRRAGGGaggvamagpsspptprSAEQRWKWVENYCWINGCLRSQNQCNDKWDNLLRDYKKVRDYEARRA 153 ************77777665534566677777777777****************************************99974 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MSASSDPSPS SSAAAAASAS PLAAYHAHPH HPHHHLHLST PPPHAYPPAA PPPSPASAPR 60 DYRKGNWTMH ETLILITAKR LDDDRRAGGG AGGVAMAGPS SPPTPRSAEQ RWKWVENYCW 120 INGCLRSQNQ CNDKWDNLLR DYKKVRDYEA RRASIAATPP VDGAPAQPPT PLPSYWTMER 180 HDRKERNLPT NLAPEVYDAL LDVLSRRAAR RGGAAIAPAA PAPLALPPPP PPPPPPPSPP 240 KPLLNQQQQQ QQKHHRLHPQ PPPLLQLPAP APQPSVPSAT SVSGNARSGG VGGNGDEPEA 300 KRRRRAERLG SSVVRSATVL ARTLVACEDR RERRHREVLE LEERRLRLEA ERNEVRRQGF 360 AGLVAAVNGL SGAIHALVAD HHGRSGDSSK

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MSASSDPSPS SSAAAAASAS PLAAYHAHPH HPHHHLHLST PPPHAYPPAA PPPSPASAPR  60
DYRKGNWTMH ETLILITAKR LDDDRRAGGG AGGVAMAGPS SPPTPRSAEQ RWKWVENYCW  120
INGCLRSQNQ CNDKWDNLLR DYKKVRDYEA RRASIAATPP VDGAPAQPPT PLPSYWTMER  180
HDRKERNLPT NLAPEVYDAL LDVLSRRAAR RGGAAIAPAA PAPLALPPPP PPPPPPPSPP  240
KPLLNQQQQQ QQKHHRLHPQ PPPLLQLPAP APQPSVPSAT SVSGNARSGG VGGNGDEPEA  300
KRRRRAERLG SSVVRSATVL ARTLVACEDR RERRHREVLE LEERRLRLEA ERNEVRRQGF  360
AGLVAAVNGL SGAIHALVAD HHGRSGDSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	5e-45	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG076560.3