PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 831aa    MW: 92548.4 Da    PI: 6.404
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.84.2e-23133234199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2AG076490.6 133 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 221
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2AG076490.6 222 NEKNQLWLGIRRA 234
                       999999*****97 PP
2Auxin_resp110.41.9e-36259342183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.6 259 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 342
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    
MSSSSGASLG GQPPPAAPPE EEKKNLNSEL WHACAGPLVC LPTLGTRVVY FPQGHSEQVA  60
ASTNKEVEGH IPNYPNLPPQ LICQLHDVTM HADVETDEVY AQMTLQPLNP QEQNDAYLPA  120
EMGIMSKQPT NYFCKTLTAS DTSTHGGFSV PRRAAERVFP PLDFTQQPPA QELIARDIHD  180
VEWKFRHIFR GQPKRHLLTT GWSVFVSAKR LVAGDSVLFI WNEKNQLWLG IRRANRTQTV  240
MPSSVLSSDS MHIGLLAAAA HAASTNSRFT IFYNPRACPS EFVIPLSKYI KAVFHTRISV  300
GMRFRMLFET EESSVRRYMG TITEVSDADP VRWASSYWRS VKVGWDESTA GERPPRVSLW  360
EIEPLTTFPM YPSLFPLRVK HPWYSGVAGL QDDSNALMWL RGVAGDGGYQ SMNFQSPGIG  420
SWGQQRLHPS LMSTDHDQYQ AVVAAAAAAS QSGGYMKQQF LNLQQPMQSP QEHCNLNPLL  480
QQQILQQASQ QQTVSADSQN IQTMLNSSAI QHQLQQLQQL QQVHQVQQAQ QAHIDQKQKI  540
QSDQTYHVPT SASLPSPTSL PSHLREKFGF SDPNANSSSF TTSSSSDNML ESNFLQGNSK  600
AVNLSRFNQP VASDQQQQQQ QQQQQQAWKQ KFMGSQSLSF GGSGLLNSPT SKDGSLESKI  660
GSDVQHQSLF SPQVDSSSLL YNMVPNMTSN VADNNMSTIP SGSTYLQSPM YGCLDDSSGI  720
FQNTGENDPT SRTFVKVYKS GSVGRSLDIT RFSNYAELRE ELGQMYGIRG QLDDPDRSGW  780
QLVFVDREND VLLLGDDPWE SFVNSVWYIK ILSPEDVHKL GKQGNDPRYL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein