PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 803aa    MW: 89234.5 Da    PI: 6.2066
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.94e-23135236199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2AG076490.3 135 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 223
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2AG076490.3 224 NEKNQLWLGIRRA 236
                       999999*****97 PP
2Auxin_resp110.41.8e-36261344183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.3 261 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 344
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    
GEMSSSSGAS LGGQPPPAAP PEEEKKNLNS ELWHACAGPL VCLPTLGTRV VYFPQGHSEQ  60
VAASTNKEVE GHIPNYPNLP PQLICQLHDV TMHADVETDE VYAQMTLQPL NPQEQNDAYL  120
PAEMGIMSKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAERV FPPLDFTQQP PAQELIARDI  180
HDVEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNEKNQLW LGIRRANRTQ  240
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAC PSEFVIPLSK YIKAVFHTRI  300
SVGMRFRMLF ETEESSVRRY MGTITEVSDA DPVRWASSYW RSVKVGWDES TAGERPPRVS  360
LWEIEPLTTF PMYPSLFPLR VKHPWYSGVA GLQDDSNALM WLRGVAGDGG YQSMNFQSPG  420
IGSWGQQRLH PSLMSTDHDQ YQAVVAAAAA ASQSGGYMKQ QFLNLQQPMQ SPQEHCNLNP  480
LLQQQILQQA SQQQTVSADS QNIQTMLNSS AIQHQLQQLQ QLQQVHQVQQ AQQAHIDQKQ  540
KIQSDQTYHV PTSASLPSPT SLPSHLREKF GFSDPNANSS SFTTSSSSDN MLESNFLQGN  600
SKAVNLSRFN QPVASDQQQQ QQQQQQQQAW KQKFMGSQSL SFGGSGLLNS PTSKDGSLES  660
KIGSDVQHQS LFSPQVDSSS LLYNMVPNMT SNVADNNMST IPSGSTYLQS PMYGCLDDSS  720
GIFQNTGEND PTSRTFVKVY KSGSVGRSLD ITRFSNYAEL REELGQMYGI RGQLDDPDRS  780
GWQLVFVDRE NDVLLLGDDP WDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein