PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG076490.23

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 647aa MW: 72129.3 Da PI: 6.6819

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG076490.23	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.3	8.4e-11	7	50	54	99
EETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 54 kksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ TRIDC2AG076490.23 7 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLWLGIRRA 50 67899***********************..8999999***97 PP
2	Auxin_resp	110.9	1.3e-36	75	158	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPra++seFv++++k+ ka+ +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW S Wrs+k TRIDC2AG076490.23 75 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 158 79*****************************986599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
SDTSSEGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLWLGIRRA NRTQTVMPSS 60 VLSSDSMHIG LLAAAAHAAS TNSRFTIFYN PRACPSEFVI PLSKYIKAVF HTRISVGMRF 120 RMLFETEESS VRRYMGTITE VSDADPVRWA SSYWRSVKVG WDESTAGERP PRVSLWEIEP 180 LTTFPMYPSL FPLRVKHPWY SGVAGLQDDS NALMWLRGVA GDGGYQSMNF QSPGIGSWGQ 240 QRLHPSLMST DHDQYQAVVA AAAAASQSGG YMKQQFLNLQ QPMQSPQEHC NLNPLLQQQI 300 LQQASQQQTV SADSQNIQTM LNSSAIQHQL QQLQQLQQVH QVQQAQQAHI DQKQKIQSDQ 360 TYHVPTSASL PSPTSLPSHL REKFGFSDPN ANSSSFTTSS SSDNMLESNF LQGNSKAVNL 420 SRFNQPVASD QQQQQQQQQQ QQAWKQKFMG SQSLSFGGSG LLNSPTSKDG SLESKIGSDV 480 QHQSLFSPQV DSSSLLYNMV PNMTSNVADN NMSTIPSGST YLQSPMYGCL DDSSGIFQNT 540 GENDPTSRTF VKVYKSGSVG RSLDITRFSN YAELREELGQ MYGIRGQLDD PDRSGWQLVF 600 VDRENDVLLL GDDPWESFVN SVWYIKILSP EDVHKLGKQG NDPRYLS

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

SDTSSEGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLWLGIRRA NRTQTVMPSS  60
VLSSDSMHIG LLAAAAHAAS TNSRFTIFYN PRACPSEFVI PLSKYIKAVF HTRISVGMRF  120
RMLFETEESS VRRYMGTITE VSDADPVRWA SSYWRSVKVG WDESTAGERP PRVSLWEIEP  180
LTTFPMYPSL FPLRVKHPWY SGVAGLQDDS NALMWLRGVA GDGGYQSMNF QSPGIGSWGQ  240
QRLHPSLMST DHDQYQAVVA AAAAASQSGG YMKQQFLNLQ QPMQSPQEHC NLNPLLQQQI  300
LQQASQQQTV SADSQNIQTM LNSSAIQHQL QQLQQLQQVH QVQQAQQAHI DQKQKIQSDQ  360
TYHVPTSASL PSPTSLPSHL REKFGFSDPN ANSSSFTTSS SSDNMLESNF LQGNSKAVNL  420
SRFNQPVASD QQQQQQQQQQ QQAWKQKFMG SQSLSFGGSG LLNSPTSKDG SLESKIGSDV  480
QHQSLFSPQV DSSSLLYNMV PNMTSNVADN NMSTIPSGST YLQSPMYGCL DDSSGIFQNT  540
GENDPTSRTF VKVYKSGSVG RSLDITRFSN YAELREELGQ MYGIRGQLDD PDRSGWQLVF  600
VDRENDVLLL GDDPWESFVN SVWYIKILSP EDVHKLGKQG NDPRYLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	1e-121	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG076490.23