PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG076490.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 754aa MW: 83701.7 Da PI: 6.6909

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG076490.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73	3.7e-23	135	236	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d + +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F + TRIDC2AG076490.2 135 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 223 99*********************9*86555544..8********************************************..8 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ TRIDC2AG076490.2 224 NEKNQLWLGIRRA 236 999999***97 PP
2	Auxin_resp	110.6	1.6e-36	261	344	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPra++seFv++++k+ ka+ +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW S Wrs+k TRIDC2AG076490.2 261 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 344 79*****************************986599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
GEMSSSSGAS LGGQPPPAAP PEEEKKNLNS ELWHACAGPL VCLPTLGTRV VYFPQGHSEQ 60 VAASTNKEVE GHIPNYPNLP PQLICQLHDV TMHADVETDE VYAQMTLQPL NPQEQNDAYL 120 PAEMGIMSKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAERV FPPLDFTQQP PAQELIARDI 180 HDVEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNEKNQLW LGIRRANRTQ 240 TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAC PSEFVIPLSK YIKAVFHTRI 300 SVGMRFRMLF ETEESSVRRY MGTITEVSDA DPVRWASSYW RSVKVGWDES TAGERPPRVS 360 LWEIEPLTTF PMYPSLFPLR VKHPWYSGVA GLQETEVYDS NALMWLRGVA GDGGYQSMNF 420 QSPGIGSWGQ QRLHPSLMST DHDQYQAVVA AAAAASQSGG YMKQQFLNLQ QPMQSPQEHC 480 NLNPLLQQQI LQQASQQQTV SADSQNIQTM LNSSAIQHQL QQLQQLQQVH QVQQAQQAHI 540 DQKQKIQSDQ TYHVPTSASL PSPTSLPSHL REKFGFSDPN ANSSSFTTSS SSDNMLESNF 600 LQGNSKAVNL SRFNQPVASD QQQQQQQQQQ QQAWKQKFMG SQSLSFGGSG LLNSPTSKDG 660 SLESKIGSDV QHQSLFSPQV DSSSLLYNMV PNMTSNVADN NMSTIPSGST YLQSPMYGCL 720 DDSSGIFQNT GENDPTSRTF VKVVVVRCIF LHQV

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

GEMSSSSGAS LGGQPPPAAP PEEEKKNLNS ELWHACAGPL VCLPTLGTRV VYFPQGHSEQ  60
VAASTNKEVE GHIPNYPNLP PQLICQLHDV TMHADVETDE VYAQMTLQPL NPQEQNDAYL  120
PAEMGIMSKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAERV FPPLDFTQQP PAQELIARDI  180
HDVEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNEKNQLW LGIRRANRTQ  240
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAC PSEFVIPLSK YIKAVFHTRI  300
SVGMRFRMLF ETEESSVRRY MGTITEVSDA DPVRWASSYW RSVKVGWDES TAGERPPRVS  360
LWEIEPLTTF PMYPSLFPLR VKHPWYSGVA GLQETEVYDS NALMWLRGVA GDGGYQSMNF  420
QSPGIGSWGQ QRLHPSLMST DHDQYQAVVA AAAAASQSGG YMKQQFLNLQ QPMQSPQEHC  480
NLNPLLQQQI LQQASQQQTV SADSQNIQTM LNSSAIQHQL QQLQQLQQVH QVQQAQQAHI  540
DQKQKIQSDQ TYHVPTSASL PSPTSLPSHL REKFGFSDPN ANSSSFTTSS SSDNMLESNF  600
LQGNSKAVNL SRFNQPVASD QQQQQQQQQQ QQAWKQKFMG SQSLSFGGSG LLNSPTSKDG  660
SLESKIGSDV QHQSLFSPQV DSSSLLYNMV PNMTSNVADN NMSTIPSGST YLQSPMYGCL  720
DDSSGIFQNT GENDPTSRTF VKVVVVRCIF LHQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG076490.2