PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 774aa    MW: 86634.8 Da    PI: 6.5517
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.93.8e-2376177199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC2AG076490.19  76 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 163
                        99***********************9*****86555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC2AG076490.19 164 WNEKNQLWLGIRRA 177
                        8999999*****97 PP
2Auxin_resp110.51.7e-36202285183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.19 202 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 285
                        79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 774 aa     Download sequence    
KVAASTNKEV EGHIPNYPNL PPQLICQLHD VTMHADVETD EVYAQMTLQP LNPQEQNDAY  60
LPAEMGIMSK QPTNYFCKTL TASDTSTHGG FSVPRRAAER VFPPLDFTQQ PPAQELIARD  120
IHDVEWKFRH IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNEKNQL WLGIRRANRT  180
QTVMPSSVLS SDSMHIGLLA AAAHAASTNS RFTIFYNPRA CPSEFVIPLS KYIKAVFHTR  240
ISVGMRFRML FETEESSVRR YMGTITEVSD ADPVRWASSY WRSVKVGWDE STAGERPPRV  300
SLWEIEPLTT FPMYPSLFPL RVKHPWYSGV AGLQDDSNAL MWLRGVAGDG GYQSMNFQSP  360
GIGSWGQQRL HPSLMSTDHD QYQAVVAAAA AASQSGGYMK QQFLNLQQPM QSPQEHCNLN  420
PLLQQQILQQ ASQQQTVSAD SQNIQTMLNS SAIQHQLQQL QQLQQVHQVQ QAQQAHIDQK  480
QKIQSDQTYH VPTSASLPSP TSLPSHLREK FGFSDPNANS SSFTTSSSSD NMLESNFLQG  540
NSKAVNLSRF NQPVASDQQQ QQQQQQQQQA WKQKFMGSQS LSFGGSGLLN SPTSKDGSLE  600
SKIGSDVQHQ SLFSPQVDSS SLLYNMVPNM TSNVADNNMS TIPSGSTYLQ SPMYGCLDDS  660
SGIFQNTGEN DPTSRTFVKV YKSGSVGRSL DITRFSNYAE LREELGQMYG IRGQLDDPDR  720
SGWQLVFVDR ENDVLLLGDD PWESFVNSVW YIKILSPEDV HKLGKQGNDP RYLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein