PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 794aa    MW: 88833.3 Da    PI: 6.5114
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.94e-2396197199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC2AG076490.11  96 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 183
                        99***********************9*****86555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC2AG076490.11 184 WNEKNQLWLGIRRA 197
                        8999999*****97 PP
2Auxin_resp110.51.8e-36222305183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.11 222 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 305
                        79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    
LVCLPTLGTR VVYFPQGHSE QVAASTNKEV EGHIPNYPNL PPQLICQLHD VTMHADVETD  60
EVYAQMTLQP LNPQEQNDAY LPAEMGIMSK QPTNYFCKTL TASDTSTHGG FSVPRRAAER  120
VFPPLDFTQQ PPAQELIARD IHDVEWKFRH IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV  180
LFIWNEKNQL WLGIRRANRT QTVMPSSVLS SDSMHIGLLA AAAHAASTNS RFTIFYNPRA  240
CPSEFVIPLS KYIKAVFHTR ISVGMRFRML FETEESSVRR YMGTITEVSD ADPVRWASSY  300
WRSVKVGWDE STAGERPPRV SLWEIEPLTT FPMYPSLFPL RVKHPWYSGV AGLQDDSNAL  360
MWLRGVAGDG GYQSMNFQSP GIGSWGQQRL HPSLMSTDHD QYQAVVAAAA AASQSGGYMK  420
QQFLNLQQPM QSPQEHCNLN PLLQQQILQQ ASQQQTVSAD SQNIQTMLNS SAIQHQLQQL  480
QQLQQVHQVQ QAQQAHIDQK QKIQSDQTYH VPTSASLPSP TSLPSHLREK FGFSDPNANS  540
SSFTTSSSSD NMLESNFLQG NSKAVNLSRF NQPVASDQQQ QQQQQQQQQA WKQKFMGSQS  600
LSFGGSGLLN SPTSKDGSLE SKIGSDVQHQ SLFSPQVDSS SLLYNMVPNM TSNVADNNMS  660
TIPSGSTYLQ SPMYGCLDDS SGIFQNTGEN DPTSRTFVKV YKSGSVGRSL DITRFSNYAE  720
LREELGQMYG IRGQLDDPDR SGWQLVFVDR ENDVLLLGDD PWESFVNSVW YIKILSPEDV  780
HKLGKQGNDP RYLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein