PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG075070.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 159aa MW: 17342.8 Da PI: 9.7714 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.2 | 9.3e-06 | 44 | 81 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +++eYIk L TRIDC2AG075070.3 44 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 81 77788899********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
LHLRTVLEGV GDSSSIVTKK ASGEPAFKKP RMETPSPLPT FKVRKEKLGD RITALQQLVS 60 PFGKTDTASV LHETIEYIKF LHDQVGVLSA PYLKSGHHQH QVPQYLKSSS NGSPDKSCKD 120 GGEVSLKGRG LCLVPISSTF AVASDVPVDF WNPFGPQFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.3 | 2e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG075070.3 |