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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG072270.6 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | AP2 | ||||||||
| Protein Properties | Length: 109aa MW: 12456.1 Da PI: 9.7457 | ||||||||
| Description | AP2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 35.9 | 1.8e-11 | 70 | 109 | 1 | 44 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44
s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+
TRIDC2AG072270.6 70 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAAR 109
89********.7******5553..2.26**************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 109 aa Download sequence |
MARRIAGGFD TAHAAARAYD RAAIKFRGME ADINFSLEDY DDIKQMGNLT KEEFVHVLRR 60 QSTGFPRGSS KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDTEEEAAR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G36920.1 | 9e-56 | AP2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG072270.6 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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