PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG072270.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 476aa MW: 50285.5 Da PI: 7.4727 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.2e-17 | 112 | 161 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC2AG072270.3 112 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 161 78*******************......55************************998 PP | |||||||
2 | AP2 | 43.1 | 1.1e-13 | 203 | 253 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2AG072270.3 203 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 253 89********.7******5553..2.26**********************99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
MWDLNDSPAA EAPPLSPSVD DSGASSSSAA AVVEIPDDAD DDSAEAVVTR QFFPPAAPGE 60 AAAGNGRAAW LRLAGAPAPA VAAAAAGAGA AGGPAAAAAA KKSRRGPRSR SSQYRGVTFY 120 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GMEADINFSL EDYDDIKQMG 180 NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEEEA 240 ARSYDRAAIK CNGKDAVTNF DPSTYAEEFE PAASTGDAEQ NLDLSLGSSG GSNKRGSLDG 300 GGGDDEGAAG SDQRVPMAFE LDWQTARSTK AKFDQNSPHR QMPPPALQAS HMAFSPRQHQ 360 FMGSADPGTA GGLSLTVGAG AGGLAGHWPP HHQYQPPPPP PPPQQQQRMH GWGNVVPGRS 420 WQPPQPPPHH QAGPPPNNAA AAAAAAAASS RFPPYIAAQA QSWLQKNGFH SLARPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-92 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG072270.3 |