PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG072270.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 458aa MW: 48154.2 Da PI: 7.0069

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG072270.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.4	3.1e-17	112	161	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC2AG072270.2 112 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 161 78*****************......55**********************998 PP
2	AP2	43.2	1e-13	203	253	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2AG072270.2 203 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 253 89******.7**5553..2.26********************99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MWDLNDSPAA EAPPLSPSVD DSGASSSSAA AVVEIPDDAD DDSAEAVVTR QFFPPAAPGE 60 AAAGNGRAAW LRLAGAPAPA VAAAAAGAGA AGGPAAAAAA KKSRRGPRSR SSQYRGVTFY 120 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GMEADINFSL EDYDDIKQMG 180 NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEEEA 240 ARSYDRAAIK CNGKDAVTNF DPSTYAEEFE PAASTGDAEQ NLDLSLGSSG GSNKRGSLDG 300 GGGDDEGAAG SDQRVPMAFE LDWQTARSTK AKFDQNSPHR QMPPPALQAS HMAFSPRQHQ 360 QFMGSADPGT AGGLSLTVGA GAGGLAAAED ARLGQRRARQ ELAAASAAAA PPGGSAAEQR 420 CRRRSSSCSI ITIPTLHRRA GAELAPEERL PLPGQTHL

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MWDLNDSPAA EAPPLSPSVD DSGASSSSAA AVVEIPDDAD DDSAEAVVTR QFFPPAAPGE  60
AAAGNGRAAW LRLAGAPAPA VAAAAAGAGA AGGPAAAAAA KKSRRGPRSR SSQYRGVTFY  120
RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GMEADINFSL EDYDDIKQMG  180
NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEEEA  240
ARSYDRAAIK CNGKDAVTNF DPSTYAEEFE PAASTGDAEQ NLDLSLGSSG GSNKRGSLDG  300
GGGDDEGAAG SDQRVPMAFE LDWQTARSTK AKFDQNSPHR QMPPPALQAS HMAFSPRQHQ  360
QFMGSADPGT AGGLSLTVGA GAGGLAAAED ARLGQRRARQ ELAAASAAAA PPGGSAAEQR  420
CRRRSSSCSI ITIPTLHRRA GAELAPEERL PLPGQTHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	2e-93	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG072270.2