PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG070620.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 382aa    MW: 41419.4 Da    PI: 7.7012
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG070620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.82.1e-40149227178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EE.ETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvl.vsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cq+egC+adls ak+yhrrhkvCe+hskapvv+ + gl+qrfCqqCsrfh l+efD++k+sCr+rLa+hn+rrrk+++
  TRIDC2AG070620.1 149 RCQAEGCKADLSGAKRYHRRHKVCEHHSKAPVVVtAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSKP 227
                       6******************************98725689*************************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
IMDHQEGGGG IHREHDHHHH HHLGGYSLEP SSLALLPPSS HATIAAHSPH DILQFYHHPT  60
SHHYLAAAAA GGNGSPYGQF GGGGTAGGFQ SYYHQQAGTG APEYYFPTLV SSAEENMASF  120
AATQLGLNLG YRTYFPPRGG YTYGHHPPRC QAEGCKADLS GAKRYHRRHK VCEHHSKAPV  180
VVTAGGLHQR FCQQCSRFHL LDEFDDAKKS CRKRLADHNR RRRKSKPSEG DAADKRRAQA  240
SKAASAKEAA GSSSKSTGTG DAMDIQVQLG SGDLSKDQDE TMGHGEAVKE MQVDPKGKAS  300
MMQQQQQQQG HHGHGLHLQS QHGFPFPSSS AGSCFPQSQA VSSTDNTSNI GHVQQEQPAL  360
GFHQHSNILQ LGQAMFDLDF DH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220237RRRRKSKPSEGDAADKRR
2221226RRRKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.12e-42SBP family protein