PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG070620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 382aa MW: 41419.4 Da PI: 7.7012 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.8 | 2.1e-40 | 149 | 227 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EE.ETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvl.vsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls ak+yhrrhkvCe+hskapvv+ + gl+qrfCqqCsrfh l+efD++k+sCr+rLa+hn+rrrk+++ TRIDC2AG070620.1 149 RCQAEGCKADLSGAKRYHRRHKVCEHHSKAPVVVtAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSKP 227 6******************************98725689*************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
IMDHQEGGGG IHREHDHHHH HHLGGYSLEP SSLALLPPSS HATIAAHSPH DILQFYHHPT 60 SHHYLAAAAA GGNGSPYGQF GGGGTAGGFQ SYYHQQAGTG APEYYFPTLV SSAEENMASF 120 AATQLGLNLG YRTYFPPRGG YTYGHHPPRC QAEGCKADLS GAKRYHRRHK VCEHHSKAPV 180 VVTAGGLHQR FCQQCSRFHL LDEFDDAKKS CRKRLADHNR RRRKSKPSEG DAADKRRAQA 240 SKAASAKEAA GSSSKSTGTG DAMDIQVQLG SGDLSKDQDE TMGHGEAVKE MQVDPKGKAS 300 MMQQQQQQQG HHGHGLHLQS QHGFPFPSSS AGSCFPQSQA VSSTDNTSNI GHVQQEQPAL 360 GFHQHSNILQ LGQAMFDLDF DH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 220 | 237 | RRRRKSKPSEGDAADKRR |
2 | 221 | 226 | RRRKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 2e-42 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG070620.1 |