PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG068740.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 262aa MW: 27022.2 Da PI: 8.7032 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.5 | 2.2e-08 | 52 | 77 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C + Ck+Gd+C+FaHg+ TRIDC2AG068740.8 52 KTRMCTKYNTAEGCKFGDKCHFAHGE 77 89**********************96 PP | |||||||
2 | zf-CCCH | 38.6 | 1.7e-12 | 228 | 253 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ykt++C +f++ GtC +G+rC+FaHg+ TRIDC2AG068740.8 228 YKTKICENFLK-GTCTFGERCHFAHGE 253 9**********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
FDTVGCPFGE GCHFAHFVPG GYQAVSKSHS LGHAAVSAPS RAPADHAASG VKTRMCTKYN 60 TAEGCKFGDK CHFAHGEREL GRPPSSYMSQ ESSYAPPMGG RYGGRHEPPP PASMGPPAGN 120 FGASSTCKVS VDAALAGGII GKGGVNTKQI CRITGVKLSI RDHESNPDLK NIELEGSFDQ 180 IKQANDMVRD LIASISASTP SKNPASAAAP AGRGGGGGGG GPGGRSNYKT KICENFLKGT 240 CTFGERCHFA HGETEQRKGA AV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 4e-50 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG068740.8 |