PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG068740.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 267aa MW: 27575 Da PI: 8.893 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.5 | 2.3e-08 | 57 | 82 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C + Ck+Gd+C+FaHg+ TRIDC2AG068740.7 57 KTRMCTKYNTAEGCKFGDKCHFAHGE 82 89**********************96 PP | |||||||
2 | zf-CCCH | 38.6 | 1.8e-12 | 233 | 258 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ykt++C +f++ GtC +G+rC+FaHg+ TRIDC2AG068740.7 233 YKTKICENFLK-GTCTFGERCHFAHGE 258 9**********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MRTLLPCTVG CPFGEGCHFA HFVPGGYQAV SKSHSLGHAA VSAPSRAPAD HAASGVKTRM 60 CTKYNTAEGC KFGDKCHFAH GERELGRPPS SYMSQESSYA PPMGGRYGGR HEPPPPASMG 120 PPAGNFGASS TCKVSVDAAL AGGIIGKGGV NTKQICRITG VKLSIRDHES NPDLKNIELE 180 GSFDQIKQAN DMVRDLIASI SASTPSKNPA SAAAPAGRGG GGGGGGPGGR SNYKTKICEN 240 FLKGTCTFGE RCHFAHGETE QRKGAAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 5e-50 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG068740.7 |