PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG068740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 208aa    MW: 21561.2 Da    PI: 8.7479
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG068740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.12.6e-07223627
                      -SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  6 CrffartGtCkyGdrCkFaHgp 27
                      C  +     Ck+Gd+C+FaHg+
  TRIDC2AG068740.1  2 CTKYNTAEGCKFGDKCHFAHGE 23
                      888999889***********96 PP
2zf-CCCH39.11.3e-12174199127
                       --S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                       ykt++C +f++ GtC +G+rC+FaHg+
  TRIDC2AG068740.1 174 YKTKICENFLK-GTCTFGERCHFAHGE 199
                       9**********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MCTKYNTAEG CKFGDKCHFA HGERELGRPP SSYMSQESSY APPMGGRYGG RHEPPPPASM  60
GPPAGNFGAS STCKVSVDAA LAGGIIGKGG VNTKQICRIT GVKLSIRDHE SNPDLKNIEL  120
EGSFDQIKQA NDMVRDLIAS ISASTPSKNP ASAAAPAGRG GGGGGGGPGG RSNYKTKICE  180
NFLKGTCTFG ERCHFAHGET EQRKGAAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.15e-50C3H family protein