PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG066960.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 771aa MW: 83136 Da PI: 5.4295 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.3 | 1.7e-20 | 110 | 166 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k+ TRIDC2AG066960.7 110 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 166 688999************************************************995 PP | |||||||
2 | START | 187 | 9.6e-59 | 287 | 506 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS START 1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv........dsgealrasgvvdmvlallveellddkeqWdetla....k 78 ela +a++el+++a +++p+W + + ++++e+ + f + ++ +ea+r+ +vv+m++a lve+l+d++ q+ + + TRIDC2AG066960.7 287 ELAVAAMEELLRMARLDDPLWATTVdqaLALDEEEYARMFIDPRGglgpkqygLVSEASRDAAVVIMTPASLVEILMDVN-QYAAVFSsivsR 378 57899********************8776688888888886666679*********************************.66666655555* PP EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE CS START 79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv 164 a+tlev+s+g galq+m+ e+q++splvp R+++fvRy+++ +g w++vdvS+d q + +++++pSg+li++ +ng+skv TRIDC2AG066960.7 379 AATLEVLSTGvagcydGALQVMSVEFQVPSPLVPtRESYFVRYCKRNADGAWAVVDVSLDGLQGV-------KCRRRPSGCLIQEAPNGYSKV 464 ************************************************************99985.......699****************** PP EEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 165 twvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 twvehv++++r++h+++++lv+sgla+ga++wv l+rqce+ TRIDC2AG066960.7 465 TWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCER 506 ****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 771 aa Download sequence |
GLIASMFSGT PLTDDGPKLC FLYKLQPNLL DGSNQHLLPH HLLEQIPARA AESGDNNNGS 60 VGGGVGMIRG RDSMDPLGDE FESRSGSENV DGDAVDNAEQ DQDPNQRPRK KRYHRHTQHQ 120 IQEMEAFFKE CPHPDDKQRK ELSRELGLEP LQVKFWFQNK RTQMKNQHER HENSQLRADN 180 DKLRAENMRY KEALSSASCP NCGGPAALGE MSFDEHHLRV ENARLRDEID RISAIAAKYV 240 GKPMVPFPVL SSPLAAAPGA SAYDVFAGAA SVLQAPPDDK QQGVVVELAV AAMEELLRMA 300 RLDDPLWATT VDQALALDEE EYARMFIDPR GGLGPKQYGL VSEASRDAAV VIMTPASLVE 360 ILMDVNQYAA VFSSIVSRAA TLEVLSTGVA GCYDGALQVM SVEFQVPSPL VPTRESYFVR 420 YCKRNADGAW AVVDVSLDGL QGVKCRRRPS GCLIQEAPNG YSKVTWVEHV EVDDRSVHNI 480 YKPLVGSGLA FGARRWVGVL GRQCERLASA MASNIPTSDI GVITSSEGRK SMLKLAERMV 540 ASFCGGVTAS VAHQWTTLSG SGAEDVRVMT RKSVDDPGRP PGIVLNAATS FWLPVPPKRV 600 FDFLRDETSR SEWDILSNGG IVQEMAHIAN GRDHGNCVSL LRVNSTNSNQ SNMLILQESC 660 TDASGSYVIY APVDVVAMNV VLNGGDTDYV ALLPSGFAIL PDGPAGTMHA AAGATGTGGS 720 LLTVAFQILV DSVPTAKLSL GSVATVNSLI ACTVERIKTA VISNGGASPP Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG066960.7 |