PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG066960.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 679aa    MW: 72882.9 Da    PI: 6.0122
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG066960.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.54e-172074357
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                      +Rtt  +  ++ L ++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  TRIDC2AG066960.6 20 ERTTGDAAFIQGLRTFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 74
                      6899999999******************************************995 PP
2START187.47.5e-591954141206
                       HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
             START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv........dsgealrasgvvdmvlallveellddkeqWdetla....k 78 
                       ela +a++el+++a +++p+W + +     ++++e+ + f + ++          +ea+r+ +vv+m++a lve+l+d++ q+   +     +
  TRIDC2AG066960.6 195 ELAVAAMEELLRMARLDDPLWATTVdqaLALDEEEYARMFIDPRGglgpkqygLVSEASRDAAVVIMTPASLVEILMDVN-QYAAVFSsivsR 286
                       57899********************8776688888888886666679*********************************.66666655555* PP

                       EEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE CS
             START  79 aetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv 164
                       a+tlev+s+g      galq+m+ e+q++splvp R+++fvRy+++  +g w++vdvS+d  q +       +++++pSg+li++ +ng+skv
  TRIDC2AG066960.6 287 AATLEVLSTGvagcydGALQVMSVEFQVPSPLVPtRESYFVRYCKRNADGAWAVVDVSLDGLQGV-------KCRRRPSGCLIQEAPNGYSKV 372
                       ************************************************************99985.......699****************** PP

                       EEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 165 twvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                       twvehv++++r++h+++++lv+sgla+ga++wv  l+rqce+
  TRIDC2AG066960.6 373 TWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCER 414
                       ****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    
PGPKAERATV SVVLRPSPNE RTTGDAAFIQ GLRTFFKECP HPDDKQRKEL SRELGLEPLQ  60
VKFWFQNKRT QMKNQHERHE NSQLRADNDK LRAENMRYKE ALSSASCPNC GGPAALGEMS  120
FDEHHLRVEN ARLRDEIDRI SAIAAKYVGK PMVPFPVLSS PLAAAPGASA YDVFAGAASV  180
LQAPPDDKQQ GVVVELAVAA MEELLRMARL DDPLWATTVD QALALDEEEY ARMFIDPRGG  240
LGPKQYGLVS EASRDAAVVI MTPASLVEIL MDVNQYAAVF SSIVSRAATL EVLSTGVAGC  300
YDGALQVMSV EFQVPSPLVP TRESYFVRYC KRNADGAWAV VDVSLDGLQG VKCRRRPSGC  360
LIQEAPNGYS KVTWVEHVEV DDRSVHNIYK PLVGSGLAFG ARRWVGVLGR QCERLASAMA  420
SNIPTSDIGV ITSSEGRKSM LKLAERMVAS FCGGVTASVA HQWTTLSGSG AEDVRVMTRK  480
SVDDPGRPPG IVLNAATSFW LPVPPKRVFD FLRDETSRSE WDILSNGGIV QEMAHIANGR  540
DHGNCVSLLR VNSTNSNQSN MLILQESCTD ASGSYVIYAP VDVVAMNVVL NGGDTDYVAL  600
LPSGFAILPD GPAGTMHAAA GATGTGGSLL TVAFQILVDS VPTAKLSLGS VATVNSLIAC  660
TVERIKTAVI SNGGASPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein