PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG065650.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 169aa    MW: 19553.5 Da    PI: 9.5039
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG065650.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH551.5e-172370555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      hn  ErrRRd+iN+++  L+ellP++   ++   +K+++L +A++Y+ksLq
  TRIDC2AG065650.4 23 HNFSERRRRDKINEKLKALQELLPNC---TKVHTDKVSMLDEAIDYLKSLQ 70
                      99************************...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MEDGRALRRM SIPTRRSRSA DFHNFSERRR RDKINEKLKA LQELLPNCTK VHTDKVSMLD  60
EAIDYLKSLQ LQLQMLVMGK GMAPVVPPEL QQYMHYITTD PAAQLMQMPP SEPPRPFQIT  120
HANPPQRESD FLSQMQNHLH PSDQPQINFL RPPKLQLYTP LNGITTDNA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732ERRRRD
22833RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-29bHLH family protein