PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG065540.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 265aa MW: 30499.3 Da PI: 10.2042 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 92.1 | 4e-29 | 36 | 140 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+ltpsdv+k++rlv+pk++ae++ ++ l++ede ++ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F+++ TRIDC2AG065540.3 36 FEKTLTPSDVGKLNRLVIPKQHAERYfplnggdsP--GDKDLLLSFEDEASKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERV 126 99****************************76332..235667999*********************************************88 PP SS.SEE..EEEEE- CS B3 86 gr.sefelvvkvfr 98 + ++ ++ +r TRIDC2AG065540.3 127 RGlGTGDRLFICCR 140 66544444444443 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 265 aa Download sequence |
MAMHHLSQGH PQAWPWGVAM YTNLHYHHQY EREHLFEKTL TPSDVGKLNR LVIPKQHAER 60 YFPLNGGDSP GDKDLLLSFE DEASKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI 120 VHFERVRGLG TGDRLFICCR RRGKSALPPP VRVSPPALNA GEQQPWSPMC YSTSGSYPTS 180 PANSHAYRRS VEQDHSDMIS LTPFSGEFLQ VTRRERQMPR AVRHRGRRRD VSGCSESTST 240 AVRSQRQRQQ RQCTTTPTRA PTLVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36080.2 | 3e-50 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG065540.3 |