PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG063920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 321aa MW: 35222.9 Da PI: 6.2798 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.5 | 3.6e-14 | 15 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv+ +++ Gg+ +W+ ++ g++R+ k+c++rw +yl TRIDC2AG063920.1 15 KGPWTEEEDKTLVEHIQKRGGHvgSWRGMPKAAGLNRCSKSCRLRWTNYL 64 79**********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.8e-16 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E+ l++ +++ +G++ W+tIa ++ gRt++++k++w+++ TRIDC2AG063920.1 70 RGNFSDDEERLIITLHAGHGNK-WATIATHLE-GRTDNEIKNHWNTH 114 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGRSPCCCHD VGVKKGPWTE EEDKTLVEHI QKRGGHVGSW RGMPKAAGLN RCSKSCRLRW 60 TNYLRPDIKR GNFSDDEERL IITLHAGHGN KWATIATHLE GRTDNEIKNH WNTHIRKKLL 120 RMGVDPVTHQ QLPPDHQLDG SSAALLPEAL LWAAAAATLG GLDIGALRQA QLLQHLLQAG 180 SNNDATNLVA NLMAASNVGL NSSNSIVPNI LLQDKFNMLP GTNYLQPGYL CNTSNFAEQD 240 VVQQQLINAM SPGTSSFAAA EPADQLCNTA AFTARDIAPG IDMLPVQEFA GLMEPMEQLP 300 NLCSLESDSF WKELLEDGYR L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 2e-65 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG063920.1 |