PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG063820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 363aa MW: 38974.8 Da PI: 4.5835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG063820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+ +++++G +W++ ++ g+ R++k+c++rw +yl TRIDC2AG063820.2 16 RGSWTPEEDMRLIAYIQKFGHANWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	56.1	8.8e-18	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e l++++++lG++ W++Ia++++ gRt++++k+ w+++l TRIDC2AG063820.2 69 RGNFTVEEEETLIKLHNMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQKFGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA 120 SAGEQKKGGA KGKKKTTCAD VPAPSPFPSS STTTTTTTTT NCSSGESGEQ SNTSKELELE 180 LELEKIEIPM LDLGFDLDML LDTHCPAISS APTSRCSSAS PPCVVDDGAL LDLPEIDIVP 240 ELWSIMDGEG GAGACAETAQ VPWSNAAPCD GKGPEASAAT ADDEDGKEWW LEDLEKELGL 300 WGPIDDYQYQ QPDPQGLSGR ADPLSASVDD PVSSYFQAGP ASATSTIHGP EASAVLTDIP 360 MGL

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQKFGHANWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA  120
SAGEQKKGGA KGKKKTTCAD VPAPSPFPSS STTTTTTTTT NCSSGESGEQ SNTSKELELE  180
LELEKIEIPM LDLGFDLDML LDTHCPAISS APTSRCSSAS PPCVVDDGAL LDLPEIDIVP  240
ELWSIMDGEG GAGACAETAQ VPWSNAAPCD GKGPEASAAT ADDEDGKEWW LEDLEKELGL  300
WGPIDDYQYQ QPDPQGLSGR ADPLSASVDD PVSSYFQAGP ASATSTIHGP EASAVLTDIP  360
MGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	3e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG063820.2